PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038082-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 259aa    MW: 28449.7 Da    PI: 8.0534
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038082-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.85.9e-11192237655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri  ++ +L+el+P+     +k  s +++L +Av++Ik Lq
  AUR62038082-RA 192 SIAERERRTRISGKLKKLQELVPNM----DKQTSYSDMLDLAVQHIKGLQ 237
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDSTSKTTSS SNLIRHSSSP AGFLSHLASD IGYSVPKGFD VNYNNGLAGN SSIGHDQHML  60
SRLGSQLSFT RKDHHSLSQI SEVNESVLEG MSSHGHDDHE RKRSVPSQSR SPSGFSLTAW  120
DDSNENNFVI STSSNKRGKT INDDILNGLG AIDSQQAMAL EMATMERLMR VPENSVPCKI  180
RAKRGFATHP RSIAERERRT RISGKLKKLQ ELVPNMDKQT SYSDMLDLAV QHIKGLQGQI  240
EKLNEDLDHC TCGCKPNN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.13e-63bHLH family protein