PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038160-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 155aa    MW: 17555.2 Da    PI: 7.3369
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038160-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-101444131
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                     rg W++eEde+l+++++ +G g+W++++r  
   AUR62038160-RA 14 RGLWSPEEDEKLINYITTYGHGCWSSVPRLA 44
                     788*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MGHHTCCNKQ KVKRGLWSPE EDEKLINYIT TYGHGCWSSV PRLAEILDED CGWKYISCAN  60
CKSKLDDQQY CSKCQATLEL PHRYRLIVTI EDADASITAG IFDKDAEKII GKPITTMLKI  120
HEQENGMEKV SKELRQSIGK ECTLEVKVNK KGYI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.24e-25MYB family protein