PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038167-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 192aa    MW: 21356 Da    PI: 7.2371
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038167-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.6e-11133178655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri  ++ +L+el+P+     +k  s +++L +Av++Ik Lq
  AUR62038167-RA 133 SIAERERRTRISGKLKKLQELVPNM----DKQTSYSDMLDLAVQHIKGLQ 178
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MLSRLGSQLS FTRKDHHSLS QISEVNENVL EGMSSHGHDD HEREKSVASQ SRSPSGFSLT  60
AWDDSENNFV ISTSSNKRGK TINDDILYGL GAIDSQQALA LEMATMERLM QVPENSVPCK  120
IRAKRGFATH PRSIAERERR TRISGKLKKL QELVPNMDKQ TSYSDMLDLA VQHIKGLQGQ  180
IEVMAASMEA W*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43140.29e-56bHLH family protein