PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62038328-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 225aa MW: 23793.4 Da PI: 9.7065

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62038328-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127	5.8e-40	22	81	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++lkcprCds+ntkfCyynny+lsqPr+fCk+C+ryWtkGG+lrn+PvGgg+rkn k+ AUR62038328-RA 22 EQEQLKCPRCDSNNTKFCYYNNYNLSQPRHFCKNCKRYWTKGGSLRNIPVGGGSRKNTKR 81 57899****************************************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MQDPSVAAAA AFPQLKAPQF PEQEQLKCPR CDSNNTKFCY YNNYNLSQPR HFCKNCKRYW 60 TKGGSLRNIP VGGGSRKNTK RISSKRSSST TSASSAAQTH STSSGLRPEP KPVSTFTPEV 120 ETGLRLPAPA GSAVGSFTSL LGLASEGQFS NLFLEGLAPK GLKLGQGDGS SRNPGSELFH 180 GNGGSTSEGL FMSGLQTGGD QSCNWSTTNG WPDLAIYTPG SKFQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	1e-36	Dof family protein