PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038445-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 93aa    MW: 10598 Da    PI: 8.4985
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038445-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.55.5e-072872244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     g WT+eE +++ +   +l       ++ Ia +++ g+t +q+k+++
   AUR62038445-RA 28 GEWTKEENQIFENSLGELDVSkndLFEQIAIRLP-GKTVEQIKLHY 72
                     78****************988889**********.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MNSSSSSKKS SKRPSKKSPK CHQKNNNGEW TKEENQIFEN SLGELDVSKN DLFEQIAIRL  60
PGKTVEQIKL HYEALVKDIE RIELGEFDHL IK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-12MYB family protein