PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038504-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 124aa    MW: 13711.5 Da    PI: 9.957
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038504-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.71.1e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v+++G+g W tI r          R+  ++k++w++
   AUR62038504-RA  5 KQKWTAEEEAALKAGVRKHGSGKWQTILRDPEfsnvlCSRSNVDLKDKWRN 55
                     79**********************************999***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV RKHGSGKWQT ILRDPEFSNV LCSRSNVDLK DKWRNINVTL  60
SGLGSREKAR LALKRNPQIP KLDDKPSVVN HVRSDEDAVE DELVGTPSET VQVADSKKTY  120
TRS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.19e-40MYB_related family protein