PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038574-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 156aa    MW: 17072.5 Da    PI: 9.499
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038574-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.41.5e-1048146185
            FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk...........tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                     +++++Y+k+vGF v++s  ++     + + + + t++C+++g + +++kk            ++   +r+++++gC  +l+   +k g+w ++++
  AUR62038574-RA  48 EYFRNYGKQVGFGVVRSCGETIgkgANARDTRNVTWTCKCYGLTGRKRKKtgltfvsdshiCDEVMVKRNSKKVGCGVNLNAIVNKAGEWLIKRV 142
                     589************998776666677888999**********99999888***999988877777799************************** PP

            FAR1  82 eleH 85 
                     +leH
  AUR62038574-RA 143 HLEH 146
                     **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MSEVNVGEES YKTPTKGKSN VSISVEIEEF ANVEVSLSPP PAVEKIDEYF RNYGKQVGFG  60
VVRSCGETIG KGANARDTRN VTWTCKCYGL TGRKRKKTGL TFVSDSHICD EVMVKRNSKK  120
VGCGVNLNAI VNKAGEWLIK RVHLEHVGHN PTLSK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19397RKRKK