PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038713-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LBD
Protein Properties Length: 188aa    MW: 20369.3 Da    PI: 4.8501
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038713-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26050.27.3e-1611792896
          DUF260 28 kkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96
                    +++ +v k+FG+s +  ll+++p+  r+++++sl+yeA+ r+ +Pv+G+vg++++++ +l++++++++ 
  AUR62038713-RA 11 NATVFVSKFFGRSSLFYLLESAPRALRPAVFRSLLYEACGRTINPVSGVVGLLFTGNCNLCESAVDIVF 79
                    67899*********************************************************9998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MNIYNIIHSY NATVFVSKFF GRSSLFYLLE SAPRALRPAV FRSLLYEACG RTINPVSGVV  60
GLLFTGNCNL CESAVDIVFK GGVLKPIPEF IAGFLPETSN NSGEISELEL NLSNKKRGFS  120
DVEGGLSLDL DLRLTTTTPG VVSPWMDRVK RKKSRCFELE VSGTTSCESG SSAEVEEVDV  180
VDLSLSL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.15e-35LBD family protein