PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038727-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 145aa    MW: 16883.1 Da    PI: 10.5589
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038727-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.72.8e-08104136238
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38 
                     +y+G r+++ +g++vAeIr p +   r  ++lg+f+t
  AUR62038727-RA 104 KYRGFRQRP-WGKYVAEIRYPEK---RSAVWLGTFDT 136
                     8********.**********743...6*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MTSAKYSEHQ SVTTKLLHLS SPYPSPKILN ISVRDDDATN SSGDEDDRPT SRTRVVKHIF  60
EIRFQITRTE IPTQPAFQVQ DYPQPQTRIM RQYGKRVQNE NTRKYRGFRQ RPWGKYVAEI  120
RYPEKRSAVW LGTFDTGIQP KKLP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.19e-21ERF family protein