PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038852-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 238aa    MW: 27300.9 Da    PI: 5.6251
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038852-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR131.36.7e-10127228288
            FAR1   2 fYneYAkevGFsvrkskskks.....krngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 
                     f ++Y+k+ GF v +++ +++      +n++  ++ ++C + g+++ ++k           + + ++r+++++gC  +++   ++dg wev k +
  AUR62038852-RA 127 FCRQYGKQQGFGVLRAAGNYKirngrIDNTKLRSYIWRCECAGHPDLRRKVngkrvygggLSLQLNRRKTKKCGCLVQMRAICKHDGSWEVRKAV 221
                     7789*********9998888845554445566777789********9998878888888877777899*************************** PP

            FAR1  83 leH.nHe 88 
                      eH nH+
  AUR62038852-RA 222 VEHvNHN 228
                     **98886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MEDSYTEMEQ AYIENEVVSH EEELEELELL STLIASVDDF NHLEHGLEEV FCTPLRCVVE  60
KEGQIEEVEL LSTPIALVVD NLEHGLEEGF CTPLRCVVEN EEGQIEDKLN HYEVGMVFSI  120
WQEADKFCRQ YGKQQGFGVL RAAGNYKIRN GRIDNTKLRS YIWRCECAGH PDLRRKVNGK  180
RVYGGGLSLQ LNRRKTKKCG CLVQMRAICK HDGSWEVRKA VVEHVNHNST PRKSRYI*