PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039063-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 245aa    MW: 26234.6 Da    PI: 8.487
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039063-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000531271631354
                     HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R+++ ++++ L++l+ +      +K + +++L +A+ YI+ L
  AUR62039063-RA 127 REKLGERIAVLQQLVSPY-----GKTDTSSVLHEAMGYIRFL 163
                     889999*********999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGENGGKEGE IHLPGGSFSR LLLSLEDVEE KGFSVDSPVS PTLFSSNTPN MLCFGDFISK  60
TTPKFTHTTA NTTNLTPSNS NKRRNGPGKE SENGSQNGQN QKNGVKKNKT EMGPIVTSSP  120
KHVKGKREKL GERIAVLQQL VSPYGKTDTS SVLHEAMGYI RFLHDQVKVL STPYLKLSPS  180
SSSPRHFISE KGGPSAMEMD SMEGLSSRGL CLVPLECILH VANNNGADFW SSATITSPGP  240
GLEI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.13e-31bHLH family protein