PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039123-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 205aa    MW: 23609.3 Da    PI: 8.874
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039123-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.6e-1178122347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       W+++E+ l++ +   +Ggg+W++Iar++ k+R+  q+ s+ qk+
   AUR62039123-RA  78 QWSKDEHRLFLIGEVIYGGGDWRSIARMIVKTRSSTQVASHAQKF 122
                      6******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MDFHNSSDEF GWWDVISNVY LRGKRTPEEV KNHYYKLVHD VNAIENGEVC VPKYKDDNYE  60
NYDNGQDSFI HNNAKYTQWS KDEHRLFLIG EVIYGGGDWR SIARMIVKTR SSTQVASHAQ  120
KFHDREKKPK NTKRASIHDI TTVDHETALD LHQRKLLSFE NFQTYLGKLA SKTDQQGVRS  180
FVLSRRNSVG LFHAPSPLSV SPHG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09450.12e-30MYB_related family protein