PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039129-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 375aa MW: 41983.1 Da PI: 4.4832

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039129-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.7	9.1e-34	48	139	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+++++ed+++++++sws+ nsf+v+d+ +f++ +Lpk+Fkh+nf+SF+RQLn+YgF+kv+ ++ weF+++ F g+k+ll++ AUR62039129-RA 48 FLIKTFDMVEDPSTDTIVSWSKARNSFIVWDSIKFSTLLLPKFFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQKHLLRN 133 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ AUR62039129-RA 134 IKRRRN 139 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MENVIVKEEE VTIPCNAVTG SSISSSSSVS SFSARPMEGL HEMGPPPFLI KTFDMVEDPS 60 TDTIVSWSKA RNSFIVWDSI KFSTLLLPKF FKHNNFSSFI RQLNTYGFRK VDPDRWEFAN 120 EGFLGGQKHL LRNIKRRRNV GQNIQHQGGA CVEIGHYGLE GEMERLRRDR NVLMSEIVKL 180 RQQQQVSREQ IRTMESRLQS TERKQQQMMT FLAKALTNPA FVQNLMQRNE QGRVFEGIEI 240 GRKRRLTASP SAESLQEEVL SAAVEATEGL ASVESEIQTL FSAALDDESS SDVKEPIVEP 300 DPIPSSVGAN LGSVGEISWE ELLSEDLLGE GEGYVGDEQE VDVPVEDLVP DPSNWGEDLQ 360 DLIDQMGFLR SKPE*

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MENVIVKEEE VTIPCNAVTG SSISSSSSVS SFSARPMEGL HEMGPPPFLI KTFDMVEDPS  60
TDTIVSWSKA RNSFIVWDSI KFSTLLLPKF FKHNNFSSFI RQLNTYGFRK VDPDRWEFAN  120
EGFLGGQKHL LRNIKRRRNV GQNIQHQGGA CVEIGHYGLE GEMERLRRDR NVLMSEIVKL  180
RQQQQVSREQ IRTMESRLQS TERKQQQMMT FLAKALTNPA FVQNLMQRNE QGRVFEGIEI  240
GRKRRLTASP SAESLQEEVL SAAVEATEGL ASVESEIQTL FSAALDDESS SDVKEPIVEP  300
DPIPSSVGAN LGSVGEISWE ELLSEDLLGE GEGYVGDEQE VDVPVEDLVP DPSNWGEDLQ  360
DLIDQMGFLR SKPE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	165	170	RLRRDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-120	HSF family protein