PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039219-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 209aa    MW: 24094.5 Da    PI: 7.9489
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039219-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.00017128150123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C +C+k F  k + ++H +++
  AUR62039219-RA 128 FMCRKCSKAFAVKGDWRTHEKNC 150
                     89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MTNPMMLMMK LPLFYKQHQV EEDEGHIDLD RDMTLPLLSR LSEAKAVKEE EEGHYDDEEK  60
MHMWGHGSEY RKGPESLRGT QPAAMLRLPC YCCAQGCKNN INHPRAKPLK DFRTLQTHFK  120
RKHGIKGFMC RKCSKAFAVK GDWRTHEKNC GKLWYCTCGS DFKHKRSLKD HIRSFGKGHS  180
PHPSLEGFEE EKECITTGSS EDEELASY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08290.15e-87C2H2 family protein