PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039362-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 781aa    MW: 87684.2 Da    PI: 7.0677
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039362-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS386.43.2e-1183977681374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL  cA+av s+d+++a+ lL+++++ +sp+gd +qR+a+yf+ +L+arla+ ++ +y+ l + ++s    ++ l a+++f  v+P+ k+++
  AUR62039362-RA 397 LRSLLSLCAQAVGSNDQRNANDLLKQIRQYSSPTGDGNQRMAHYFADGLEARLAGVGTPIYSCLLTGPAS---AVDILRAYHMFLAVCPFKKIGN 488
                     578999*******************************************************999999988...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +  N++I   +e+++r+HiiD++i +G+QWp+L+q L+sRp+gpp++RiTgv+ p++g   ++++eetg+rL+++Ae++++pfefn+ vak++e+
  AUR62039362-RA 489 FFSNRTITAVAEKATRLHIIDIGIVYGFQWPCLFQRLSSRPGGPPRIRITGVDLPQPGfrPAKRVEETGRRLKNYAESFNIPFEFNA-VAKKWET 582
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l++e+L+++++E+l+Vn++++l+++++e++ +e +rd vL+l+k+++P ++++   +   ns+ F +rf eal ++s+lfd+le++lpr+ +eri
  AUR62039362-RA 583 LTVEDLKIDSDEVLVVNCMFRLKYVPEETAMVECPRDMVLNLIKQIKPAIFIHGVVNGAFNSPFFITRFREALFHFSTLFDMLETNLPRDIQERI 677
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Ere++gr+++nv+aceg er+er et+++W+ r e+aGF+++pl+ ++ + ak  ++ v+ + y+++e+ ++l++gWk+r ++++S W+
  AUR62039362-RA 678 LIEREIFGRQAMNVIACEGLERIERPETYKQWQVRNERAGFRQLPLNPEILNMAKKRVKSVYHKDYSIDEDGHWLLQGWKGRIVYALSIWK 768
                     **************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 781 aa     Download sequence    
MDPQLEELYG TLHRIKFNDQ KVPILASNNH FDTAKLQDPN LNLSFANPPL IHQNPNFNVG  60
VPSVSPETDS SLHEDYDLSD VVLKYITQVL MEEDEEEKTR SHHEPSALEA TEKTLYEVIG  120
EQYPSPQNLY NLPKAKHDSW NVNGAGSLIT DSYSGASSSS GLVHPSWPVN PYEYNPVPIV  180
DFSKPSSNLS LQTSYSSSNS SGRQYDVHFN FDSPYSTASN PFGLVDATAE SPVSALNVSE  240
IFNDSQSMLQ FQKGLKEASK FLPNVLLSKD LMNNGSSQKL VGAASHDAVI KLENMHKNEI  300
PAELLIGTKH RNRDEFQLEE RRGNKQSAVS HASDEAVMRS EMFDKVLLCS GGKNDAALRE  360
VLQSGLNKNA QNSQPKGSSG GRGRGRRQGS RREVIDLRSL LSLCAQAVGS NDQRNANDLL  420
KQIRQYSSPT GDGNQRMAHY FADGLEARLA GVGTPIYSCL LTGPASAVDI LRAYHMFLAV  480
CPFKKIGNFF SNRTITAVAE KATRLHIIDI GIVYGFQWPC LFQRLSSRPG GPPRIRITGV  540
DLPQPGFRPA KRVEETGRRL KNYAESFNIP FEFNAVAKKW ETLTVEDLKI DSDEVLVVNC  600
MFRLKYVPEE TAMVECPRDM VLNLIKQIKP AIFIHGVVNG AFNSPFFITR FREALFHFST  660
LFDMLETNLP RDIQERILIE REIFGRQAMN VIACEGLERI ERPETYKQWQ VRNERAGFRQ  720
LPLNPEILNM AKKRVKSVYH KDYSIDEDGH WLLQGWKGRI VYALSIWKPV YEDLLGPKKG  780
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1384391RGRRQGSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-178GRAS family protein