PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039448-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 234aa    MW: 25917.8 Da    PI: 10.8496
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039448-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.53.1e-1378122347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  +lG g+W+ I+r + k+Rt+ q+ s+ qk+
   AUR62039448-RA  78 PWTEEEHRLFLLGLDKLGRGDWRGISRNFVKTRTPTQVASHAQKH 122
                      7******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MTAPPSKSPR TCSQCGHNGH NARTCSEHSV VPPSHTTGFR LFGVTFNADV VSSGYNSDDA  60
LHASRSRTRD RERKRGIPWT EEEHRLFLLG LDKLGRGDWR GISRNFVKTR TPTQVASHAQ  120
KHFLRQTNLN RRRRRSSLFD ITTDTVSRSA SESQLSSLDS TQQTIPFPSP YPSAFSTKQG  180
RSLPPKEREC EPLLSLKLAQ GPGQGPPLDE ESSRRSPTFR GFDGSKDSII SVA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16575RSRTRDRERKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.21e-37MYB_related family protein