PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039741-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARR-B

Protein Properties

Length: 428aa MW: 46646.9 Da PI: 6.6265

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039741-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.8	6.6e-25	175	224	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kprl W+ eLH++Fv+av+qL G++kA Pk+il+lm+v+gLt+e+v+SHLQ AUR62039741-RA 175 KPRLFWSVELHQKFVDAVNQL-GPDKAFPKKILDLMNVEGLTREKVASHLQ 224 79*****************.**************************9 PP
2	Myb_DNA-binding	39.5	1.3e-12	177	224	1	45
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 r+ W+ e+++++vdav+qlG++ +k+I m+ +g+t++ + s++q AUR62039741-RA 177 RLFWSVELHQKFVDAVNQLGPDkaFPKKILDLMNvEGLTREKVASHLQ 224 678***************99**********************98 PP
3	Response_reg	84.9	2.4e-28	16	124	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + ++l+ ++l+k +y +v+++ +++eal+llke++ +D++++D+emp+++G++ll+ e+klp+i+++a+++ + + + +k G AUR62039741-RA 16 VLVVDDDTTCLKLMDNLLKKCHY-QVTTTNQAREALKLLKENNnkFDIVITDVEMPDINGFKLLQLVGL-EMKLPVIMLSAYSDTKRVMQGVKNG 108 89*******************.***********998889***************87755.569****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ ++el + AUR62039741-RA 109 ACDYLVKPVRIQELQN 124 ***********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MNSLVENERF PMGLRVLVVD DDTTCLKLMD NLLKKCHYQV TTTNQAREAL KLLKENNNKF 60 DIVITDVEMP DINGFKLLQL VGLEMKLPVI MLSAYSDTKR VMQGVKNGAC DYLVKPVRIQ 120 ELQNIWQHVV RRNNKLIPPR GVAKRGEGTE VSCGDDINDD DEDEMENEDP STQKKPRLFW 180 SVELHQKFVD AVNQLGPDKA FPKKILDLMN VEGLTREKVA SHLQPGSKLG SIGADPEDAH 240 IGGGYGIYRS LAGNGKFPNI TSIPQQAAGG MLGRFNTNDG LFSLRALSSS PVMNFGNISS 300 FPANQNTLLS TTVQMNNKVS PATDGTSLLP LNARDLGGGH QISNIGGVGV GGGANLKARW 360 GATIECPQNL LSTSGNTHQN QSIQNDPLQF CNGVSSKGNV VDDPKLFCGR GQSSSESLED 420 VLGRFLKQ

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MNSLVENERF PMGLRVLVVD DDTTCLKLMD NLLKKCHYQV TTTNQAREAL KLLKENNNKF  60
DIVITDVEMP DINGFKLLQL VGLEMKLPVI MLSAYSDTKR VMQGVKNGAC DYLVKPVRIQ  120
ELQNIWQHVV RRNNKLIPPR GVAKRGEGTE VSCGDDINDD DEDEMENEDP STQKKPRLFW  180
SVELHQKFVD AVNQLGPDKA FPKKILDLMN VEGLTREKVA SHLQPGSKLG SIGADPEDAH  240
IGGGYGIYRS LAGNGKFPNI TSIPQQAAGG MLGRFNTNDG LFSLRALSSS PVMNFGNISS  300
FPANQNTLLS TTVQMNNKVS PATDGTSLLP LNARDLGGGH QISNIGGVGV GGGANLKARW  360
GATIECPQNL LSTSGNTHQN QSIQNDPLQF CNGVSSKGNV VDDPKLFCGR GQSSSESLED  420
VLGRFLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	4e-86	ARR-B family protein