PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039795-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ZF-HD
Protein Properties Length: 193aa    MW: 20105.7 Da    PI: 8.5094
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039795-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer111.44.6e-354197459
     ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59
                    v YkeClkNhAaslGgha+DGCgEfmp+++++ +++++lkCaACgCHRnFHRre+ee
  AUR62039795-RA 41 VLYKECLKNHAASLGGHALDGCGEFMPAPTATaSDPTSLKCAACGCHRNFHRREPEE 97
                    78***************************99999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
LSIVPPSKSP EAESETPPRI QSSKPLSFSN GVLKRHAPAI VLYKECLKNH AASLGGHALD  60
GCGEFMPAPT ATASDPTSLK CAACGCHRNF HRREPEETVN ATTPVTHVIE YHPHHRHHPL  120
PPPASNPQTA PAVATRGVRS PGSQSPPPIS SSYYPGSAPH MLLALSSGGV GATTASDELI  180
LFTTGKPKAV PN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39760.19e-40ZF-HD family protein