PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039797-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ZF-HD
Protein Properties Length: 90aa    MW: 9904.95 Da    PI: 8.4903
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039797-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer993.6e-312075359
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                    +++Y+eC+kNhAa++Gg+avDGC+Ef++s g e+t +al CaACgCHRnFHR+e  +
  AUR62039797-RA 20 STNYRECQKNHAANIGGYAVDGCREFISS-GGESTGRALVCAACGCHRNFHRKEDYS 75
                    679*************************9.8889*******************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MRNKKVILMR SADNTFQTKS TNYRECQKNH AANIGGYAVD GCREFISSGG ESTGRALVCA  60
ACGCHRNFHR KEDYSEVVSE SSYTSSTRE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.12e-26ZF-HD family protein