PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62039802-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 443aa MW: 48701.1 Da PI: 7.2133

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62039802-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.1	2.2e-39	85	145	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grr+nk+s AUR62039802-RA 85 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRRNKNSV 145 7899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MDENSIPSDR EIDKIDQDGK TFQTEQVRVS PEVSNKSTCQ AVSLRCTNNL EALSGAKEKA 60 SGESFAPEEE KAEMSSSQNT TPKKPDKILP CPRCNSMDTK FCYYNNYNVN QPRHFCKNCQ 120 RYWTAGGTMR NVPVGAGRRR NKNSVSHYCQ VTIPEALHNT QPDIPNAFHP ALPTNGTVLS 180 FSSDVPLCES MASILNLAEK TENNCSRNGF QKPEELKIPN RFGGLEHGGN DFDGSNSNDY 240 ASKSALNESA APYSLPFPQI PCYLGAPWPY PWNSTQWSSP IAAPPFCPNG FAIPFYHAPP 300 YWGYNVPGTW NIPLMAQLSH VSHSNSSSGP NSPLGKHSRD GTMLSPTNSE EKEMEGTGSE 360 RSIWIPKTLR IDDPGELAKS SIWTTLGKKN SEKPVTIGRG TGLFKAFQSK RDGNDPHMET 420 SAVLQANPAA LSRTQNFQEN SR*

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MDENSIPSDR EIDKIDQDGK TFQTEQVRVS PEVSNKSTCQ AVSLRCTNNL EALSGAKEKA  60
SGESFAPEEE KAEMSSSQNT TPKKPDKILP CPRCNSMDTK FCYYNNYNVN QPRHFCKNCQ  120
RYWTAGGTMR NVPVGAGRRR NKNSVSHYCQ VTIPEALHNT QPDIPNAFHP ALPTNGTVLS  180
FSSDVPLCES MASILNLAEK TENNCSRNGF QKPEELKIPN RFGGLEHGGN DFDGSNSNDY  240
ASKSALNESA APYSLPFPQI PCYLGAPWPY PWNSTQWSSP IAAPPFCPNG FAIPFYHAPP  300
YWGYNVPGTW NIPLMAQLSH VSHSNSSSGP NSPLGKHSRD GTMLSPTNSE EKEMEGTGSE  360
RSIWIPKTLR IDDPGELAKS SIWTTLGKKN SEKPVTIGRG TGLFKAFQSK RDGNDPHMET  420
SAVLQANPAA LSRTQNFQEN SR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	9e-85	Dof family protein