PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039913-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 227aa    MW: 25615.9 Da    PI: 9.6635
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039913-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.34.2e-07482773
            FAR1  7 AkevGFsvrkskskks..krn.geitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekd 73
                    A++ GF v+  +s ++  k+  +   + t++C + g+++++++          + +   t++++++gC+a + v ++++
  AUR62039913-RA  4 ASRKGFGVVLGQSAYKtlKDGcKVKRNVTWKCECAGFPDTRRRIggkrlpkefEGEPVATKKSKKCGCEAGMYVGLKDH 82
                    8899*****999877755333134456799**********9988999999998888899***************98874 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MILASRKGFG VVLGQSAYKT LKDGCKVKRN VTWKCECAGF PDTRRRIGGK RLPKEFEGEP  60
VATKKSKKCG CEAGMYVGLK DHDQDPDMRK ALKVVMPQTT YRRCLWHITE KFGSKLGKCL  120
GYHEFKDELK NVIYDSLFLE EFELRWKDFI VKYKLESNLW LAVIESLKEL EMKVKEKTTP  180
ALPMSSVGET GFEFTRPTVN RMALTFETPS SVGKSGIQGV IVPSGE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.18e-08FAR1 family protein