PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040157-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 190aa    MW: 22070.2 Da    PI: 9.7504
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040157-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.51.3e-193387256
                    T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    + ++++t++qle Le+ F+++r+++ +++ +LA++l L+ rqV vWFqNrRa++k
  AUR62040157-RA 33 KMKRRLTTNQLESLESSFHEERKLDPDRKMRLARELVLQPRQVAVWFQNRRARWK 87
                    567899************************************************9 PP
2HD-ZIP_I/II114.37.7e-3734125293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                      krrl+++q+++LE+sF+ee+kL+p+rK++lareL lqprqvavWFqnrRAR+k+k+lE+ y+aLk +++ +++e+++L++ev++L++ lke
  AUR62040157-RA  34 MKRRLTTNQLESLESSFHEERKLDPDRKMRLARELVLQPRQVAVWFQNRRARWKAKKLEHLYDALKLEFEVVTKEKQKLQEEVQKLKSMLKE 125
                     59*************************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MKHHGAVEMM AANVIPSNME RDMVMMSFSN QEKMKRRLTT NQLESLESSF HEERKLDPDR  60
KMRLARELVL QPRQVAVWFQ NRRARWKAKK LEHLYDALKL EFEVVTKEKQ KLQEEVQKLK  120
SMLKEQATKK QIYSSYTEAS CEETVESTSA AAANQNKSIG REHNKEGHFL FNVDNYNAIS  180
SPSYWGSLA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.12e-30HD-ZIP family protein