PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62040354-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 481aa MW: 54065.4 Da PI: 8.6214

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62040354-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.2	2.3e-07	74	164	9	87
FAR1 9 evGFsvrkskskks.krng...eitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkekdgkwevtkleleH.nH 87 + GF + +++ +++ k+++ + + ++C ++g+++ ++ +++ +r++++++C + k+k+g w+v+ lel+H nH AUR62040354-RA 74 QQGFGILRASGSYTqKKDDamnQLRGYMWKCECYGSTNYMRRIngkrvvsEREGPARRKSKKCDCVVYMYYCKNKSGDWVVKGLELQHrNH 164 568888766544442444311145667899***9998877678887766667779*****************************666 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MGVRDGQDKE FRLQPVWMGW STVDNGDNGG GSTSGANLNR DDVVLLDSDD EIRLQCNQVA 60 DSAYLCDGTQ SMRQQGFGIL RASGSYTQKK DDAMNQLRGY MWKCECYGST NYMRRINGKR 120 VVSEREGPAR RKSKKCDCVV YMYYCKNKSG DWVVKGLELQ HRNHIPTPRK SRFIAMYRQD 180 DINTAVKRKL FTDVGDAKFL DVQEECNRVL YLTPLQKVID SDADTVTHMI EDKVWVLCKD 240 TRKEFPTQYT RIYHVKIHAK TSEAYCNYKH FETYGIICRC IIKASAVVYC FPIVIESIQR 300 LDINLDATVT TAGISGVTPT KKTSPKSIKK SPASSKKKSP KSVNTIRKGT VTETENQCAL 360 NVSPSCFESG SPSTDVLVND PVSRKNPHKT PSCRHHSRVE RPKKRTPVKT KSYKNKALHP 420 QVTYNNKMFI GIEMLTEDGF VGYFTSTVEA EPDGFVLCGD DDGGVVGLDD DDLLAQHDLV 480 *

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MGVRDGQDKE FRLQPVWMGW STVDNGDNGG GSTSGANLNR DDVVLLDSDD EIRLQCNQVA  60
DSAYLCDGTQ SMRQQGFGIL RASGSYTQKK DDAMNQLRGY MWKCECYGST NYMRRINGKR  120
VVSEREGPAR RKSKKCDCVV YMYYCKNKSG DWVVKGLELQ HRNHIPTPRK SRFIAMYRQD  180
DINTAVKRKL FTDVGDAKFL DVQEECNRVL YLTPLQKVID SDADTVTHMI EDKVWVLCKD  240
TRKEFPTQYT RIYHVKIHAK TSEAYCNYKH FETYGIICRC IIKASAVVYC FPIVIESIQR  300
LDINLDATVT TAGISGVTPT KKTSPKSIKK SPASSKKKSP KSVNTIRKGT VTETENQCAL  360
NVSPSCFESG SPSTDVLVND PVSRKNPHKT PSCRHHSRVE RPKKRTPVKT KSYKNKALHP  420
QVTYNNKMFI GIEMLTEDGF VGYFTSTVEA EPDGFVLCGD DDGGVVGLDD DDLLAQHDLV  480
*