PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040652-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 216aa    MW: 24339.4 Da    PI: 10.7414
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040652-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.74.8e-14129206186
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                     f+k+l++++v  +  l lp  f+++h ++  +  +ltl de+g++ + k+  r ++    l++GW++F  +++L +gD++vF+l++
  AUR62040652-RA 129 FVKALLQAHVVGN--LNLPTAFCKTHLLNYDG--MLTLVDEDGKKCQTKFHLRYNG----LGSGWRGFSIDHHLVDGDVLVFQLIE 206
                     7899988898876..9**********666434..8***************767777....***********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MVTKTAAAAS YEEKRKKRLE ENKKRMMQLN IPQLSQALKP SPAVRLKRVK PKPKPKPDTL  60
LVNAPLRRST RMADKPPPDY HEFILVGGRR LPLGRNLYSQ INASTQIRLY AIQRAQELEL  120
RLGSQHPTFV KALLQAHVVG NLNLPTAFCK THLLNYDGML TLVDEDGKKC QTKFHLRYNG  180
LGSGWRGFSI DHHLVDGDVL VFQLIEPTTL KATSL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-39B3 family protein