PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040889-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 214aa    MW: 24342.9 Da    PI: 9.2932
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040889-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.12.1e-50241533128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                     pGfrFhPtdeelv++yLk+kve+++    e+ik+vdiyk++PwdL  ++ + ++kewyf++kr +ky+++ r+nr+t sg+Wkatg d++++s+ 
  AUR62040889-RA  24 PGFRFHPTDEELVSFYLKRKVEKRRPLSIEIIKQVDIYKHDPWDLAkASSSIGDKEWYFYCKRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSNg 118
                     9**********************99555599**************844566699***************************************85 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + + +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  AUR62040889-RA 119 geGPQCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 153
                     544455***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MSSSSKHVVA VEGGVIDDHE GPLPGFRFHP TDEELVSFYL KRKVEKRRPL SIEIIKQVDI  60
YKHDPWDLAK ASSSIGDKEW YFYCKRGRKY RNSIRPNRVT GSGFWKATGI DRPIYSNGGE  120
GPQCIGLKKS LVYYRGSAGK GTKTDWMMHE FRLPNDLQQQ DEANLANPKD TALEAGLNCY  180
LVARYYLRCE ERLRAAVLMR SCCVFLTKLV VEV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-74NAC family protein