PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62040913-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 424aa MW: 46697.9 Da PI: 5.3065

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62040913-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.1	2.3e-34	253	307	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fv+av+qLGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ AUR62040913-RA 253 KARMRWTPELHESFVDAVNQLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRT 307 68****************************************************8 PP
2	Myb_DNA-binding	57.8	2.5e-18	255	306	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +vdav+qlGg t+k + + m+ +g+t +++ks++qky+ AUR62040913-RA 255 RMRWTPELHESFVDAVNQLGGSeraTPKGVLKLMNvEGLTIYHVKSHLQKYR 306 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MEMNMRSALP MQTSSGNCYN ELKVPGSYTS PLPVLANPLE DFPKSPDPFF VSSSREMIAS 60 PLQMQADPVV SHIGSSSSAS PFVGGFPADL HFPSFAPSER LPQNSPFISQ SVGGGANYPS 120 SHGTASDFQS TGFINYQKDD DNNSWNSSHL QDLLDLPEGV SIVNGQVGNS TEVMSSENHL 180 KRIGWREMDL YADSIEPNWN ELLADSNTLD QQPKVPQSST DTVVPQPQTQ QQHPLPSREA 240 SVPANPTSST QNKARMRWTP ELHESFVDAV NQLGGSERAT PKGVLKLMNV EGLTIYHVKS 300 HLQKYRTARV RPESPERDLE KKSGSTEQVS SVDLKTSVTI TEALRMQMEV QKQLHEQLEI 360 QRKLQLQIEE QGKYLLQMLE NQNKAEKEKS KSPPKDKSEA SASEAGGSDS PPLKRSRTDD 420 SVH*

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MEMNMRSALP MQTSSGNCYN ELKVPGSYTS PLPVLANPLE DFPKSPDPFF VSSSREMIAS  60
PLQMQADPVV SHIGSSSSAS PFVGGFPADL HFPSFAPSER LPQNSPFISQ SVGGGANYPS  120
SHGTASDFQS TGFINYQKDD DNNSWNSSHL QDLLDLPEGV SIVNGQVGNS TEVMSSENHL  180
KRIGWREMDL YADSIEPNWN ELLADSNTLD QQPKVPQSST DTVVPQPQTQ QQHPLPSREA  240
SVPANPTSST QNKARMRWTP ELHESFVDAV NQLGGSERAT PKGVLKLMNV EGLTIYHVKS  300
HLQKYRTARV RPESPERDLE KKSGSTEQVS SVDLKTSVTI TEALRMQMEV QKQLHEQLEI  360
QRKLQLQIEE QGKYLLQMLE NQNKAEKEKS KSPPKDKSEA SASEAGGSDS PPLKRSRTDD  420
SVH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04450.1	3e-74	G2-like family protein