PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040942-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 183aa    MW: 20110.9 Da    PI: 9.0357
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040942-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.0005495117123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC +Cg +F+    L  H+r+H
  AUR62040942-RA  95 HKCLICGVTFPLGQALGGHMRRH 117
                     79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MVLKRSREEN YNVESTLAMA NYLVMLSQGL KTATVTHNEG RVFECTTCNR KFPSFQALGG  60
HRASHKRPRA TSNDHNHDDN DHSTDHTIKE KPKMHKCLIC GVTFPLGQAL GGHMRRHRAA  120
LSESLLPSPP HLSLSLSSPP SYDCSIGTKR KGGSLLSLDL DLNLTPQENG LLEMKTVPPI  180
FA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.12e-24C2H2 family protein