PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040948-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 204aa    MW: 23143.6 Da    PI: 10.226
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040948-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.7e-06931291152
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 
                     +R +++ ++++ L+el+ +      +K + a++L++A+ YIk
  AUR62040948-RA  93 KRSQKLSEKISALQELVSPY-----GKTDTASVLQEACIYIK 129
                     7999**************99.....9***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MPTPIENLSL ATPHLLDYRW NLPCDDSIKN DILLNQPYKP TIKDVRKSVT GAKLAQRNSV  60
LGNKASLEAS RANKKRKVIE QFVDTRKYKA PVKRSQKLSE KISALQELVS PYGKTDTASV  120
LQEACIYIKI IHQEIRRLSI SYFELRSALQ AQFQGDAERQ SDLQSKGLCL VPVSTMKSIT  180
RESWVVDHQT ASRTFKRSTY EFN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-22bHLH family protein