PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040982-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 204aa    MW: 22972.4 Da    PI: 9.5349
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040982-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.82e-0948146286
            FAR1   2 fYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk...........tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 
                     ++++Y+k+ GF v++s+  +    ++ +   + t++C + g +++++kk           ++k   +r++++++C  kl  k ++ ++w+++k  
  AUR62040982-RA  48 YFRNYGKQEGFGVVRSNGATIgkcSNANDKRDITWTCECFGLPSRKRKKsssifvsyshiSDKVCVKRKSKKVECPVKLYAKVNEVDEWVINKAM 142
                     89*************998876666666778999*********999999999****99988778888***************************** PP

            FAR1  83 leHn 86 
                     leH 
  AUR62040982-RA 143 LEHD 146
                     ***5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MLEKSPTKLL LKESVAISVE IEEYAHVEVS LPPTVGMAYE SGLKIDTYFR NYGKQEGFGV  60
VRSNGATIGK CSNANDKRDI TWTCECFGLP SRKRKKSSSI FVSYSHISDK VCVKRKSKKV  120
ECPVKLYAKV NEVDEWVINK AMLEHDGHNP TPGNSKNITK FRKKFLIENP HIVPQLFNDR  180
MAGVLFGRED MNEIENEKGK SRA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19296RKRKK
292118RKRKKSSSIFVSYSHISDKVCVKRKSK
393119KRKKSSSIFVSYSHISDKVCVKRKSKK