PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041019-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 161aa    MW: 18119.8 Da    PI: 6.2723
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041019-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.81.9e-054567123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C+k Fs+   L  H++ H
  AUR62041019-RA 45 YTCNFCKKGFSNAQALGGHMNIH 67
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MEISSQQEEK SVKFDDQAWS DSTPSTTTRE HEQVSFSDEY YVRSYTCNFC KKGFSNAQAL  60
GGHMNIHRRD RAKLRQSSIT DNSSCNDRDS MQSDTSITKT RSQLYENNET KDDIEVGKKK  120
ALALFVDSSL GKQGSSNSRV SRDDSGVDLE LRLGRSRIEI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.11e-19C2H2 family protein