PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62041111-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

C2H2

Protein Properties

Length: 215aa MW: 24697 Da PI: 5.5966

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62041111-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18	7.8e-06	10	34	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H AUR62041111-RA 10 HICPysDCGKRYAHEYKLKNHIASH 34 68*********************96 PP
2	zf-C2H2	16.4	2.5e-05	71	96	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++Cp C+k + + + L+ H+r+ H AUR62041111-RA 71 FTCPyeGCDKAYIHEYKLNLHLRReH 96 89**********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MKTHSQENYH ICPYSDCGKR YAHEYKLKNH IASHHEKNSA EVVKYTPPFE KPVKTPKPAS 60 AAYSASSDRP FTCPYEGCDK AYIHEYKLNL HLRREHPGHY AEENAKTPQP NNVDNEMDEA 120 SDQDAYAYKR STGKNLKQSR PKPNIKLPPS KMTQRKSSGI SPANVSMIKK PWPIKGDMYE 180 EEDSEETEED RDNGEDGLRY RENNEDDDEE TDED*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.2	3e-65	C2H2 family protein