PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041337-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 174aa    MW: 20098.8 Da    PI: 5.7246
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041337-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.85.9e-14447142
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcks 42
                     r+rWTteEd ll  +vkq+G++ W++++r+m+  + R +k+c +
   AUR62041337-RA  4 RQRWTTEEDALLSAYVKQYGPREWHLVSRRMNtpLDRDAKSCLE 47
                     89****************************************66 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MKERQRWTTE EDALLSAYVK QYGPREWHLV SRRMNTPLDR DAKSCLERGS HNVDNSALTL  60
GCLPSCPGAH PEPMIMLELK DCCRELDEGH RALEAHKKEA AWRLNKLELQ LESEKASQKR  120
EMMEEIEVKI NALKDEQEAS IERIEAQYRE QLAGLRRDAE AKEQKLAEQW ATK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37630.11e-42MYB family protein