PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62041375-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 1559aa MW: 173650 Da PI: 7.1569

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62041375-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42	3e-13	1104	1191	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn+Y + GFs+rk k ++ + r++ Cs+ g +++++k ++ ++ rt C+a + +++g+w k + +HnH++ AUR62041375-RA 1104 EMYNDYEFRHGFSIRKGKVRYVGSSSVWRGRNYLCSNAGLKDTSSKV--PRKYSKLDYRTCCEAYIDFVIDEKGVWTAVKHNMDHNHAMI 1191 58**************************************99877..9999999*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1559 aa Download sequence
MESSIQYYDN RCKFVAKQKD SGTDPYPKFS VTKNIAEFVE SYKSAKEDLK HVVEAIAGRI 60 MNKRGKSKSK LIFYDLCSDG HKIQLMVFAD NFELDETEFS NLHDSVKRGD IVGVSGYPGF 120 NKKGELLFCP KTFKVLSPCL HMLPDVRKAN ANVEKWVPGC SRQPESYSLK DQVETPIMNA 180 CPSIGAARHF TASSDELKVK FFMRIAPELM LKQLVVGGLE RVYEIGKQFR SENVDLTHHP 240 EFTSCEFYMA YADYNDLIVL TETLLSGMMQ RLTGSTKIKC HCAGQKKNEN ETIEIDFTPP 300 FRRIDFIKEL EKQAGIIIPK DLYSDEAHKC LLEACQKAGV TCEPSLRTAR LLDKLADHYL 360 VKNCVNPTFI MNYPILMSPL AKHDKSMDGM TERFELFVNK RELINAYTEM NDPLLQRKQF 420 EELLKDLQHG NEDMKDDPFC VSLDYALPPT AGWGIGIDRL VMLVTDSQTI KEVLLFPKSI 480 KKPRSDGQHM VKTYEFKNMF ETPGKDDPNG RDISCHDLMV IKKTDSICAD VCGQTIDELR 540 EESLVLVVLM VIRDGVREDS EGGSSGSRIE GGFGASSWWI AGNTLSRMEF LDVQKDAGIN 600 LYPQNFEAVI SIADFMVKYG ELNNEEYLKE VQVSVAGRIT RKCPRSSKLL FYDLEDGGAK 660 VQVVADARIS ELEGSEFIKF HSSVKQFDIV GVTGFPAKLL TDSLSVHPAI KPQYETASQE 720 QHCDCPSSLP QNHGVSSSLS SSFRIVVVGD IHEDWKLEHD CKALHFLRPD LVLFTGDFGN 780 ENVELVKGIT ELNIPKGAIL GNHDAWSTSK FTKKVKDGVQ LQLECLGETH VGYDHLDFPS 840 LKLSVVGGRP FSCGGDNLFR KKLITSRYGI HNMEESADQI YKAALRTPKE NSIVLLSHNG 900 PTGLGSGNDD ICGVDWEPEG GDFGDRDLAQ AILQLKESTN YSIPLVVFGH MHKDLACGGS 960 RKMIAMDENN TMYLNAAIVP RVKCASSGAS LRAFTVVEFS DGKIAKTVVP CGAWAYVDCV 1020 GGLEPQIPHV TLGCVVELRG SPPCLYRLIT DARNVCAKLM APLLGPVTRS WVRGHVYKYE 1080 VVYKESEKSE LQWKQVNSDA EAYEMYNDYE FRHGFSIRKG KVRYVGSSSV WRGRNYLCSN 1140 AGLKDTSSKV PRKYSKLDYR TCCEAYIDFV IDEKGVWTAV KHNMDHNHAM IPVEKRHLLR 1200 SQRKIQATEK ASRLEGGDCN ALIKFFDARQ AKESDFYYEF EVDGNHALCS VFWRDGIMRR 1260 DYEAFGDLMV FDTTYRTNKY GMICAPFVGM NHHCNNVMFG MGFVLDEKTS SFQFDKYFQA 1320 SGTVCALGTL VLDDDGDPLI YSHPTTQGSN LSVLPKRKNV QSKNSKSSTN ASHSSSTNVF 1380 EGYSSNNFPR PNYSQPCSSK GSNTFSTTNV QSSSGNFSSD SHPTFSNVFG HQASTNSSQP 1440 SSSKASNSFS TSKPPLSNVF EGQSSDNIPV PNSSQPSPSK ASNTFPRTNA QPSSVCGSQA 1500 KNTKTFLRAS QPPLSNVIGR QSSTYFPSTG SQSSTRNVLS GSQGKKRKSS EVNHNRGF*

Sequence ? help Back to Top

Protein Sequence Length: 1559 aa Download sequence

MESSIQYYDN RCKFVAKQKD SGTDPYPKFS VTKNIAEFVE SYKSAKEDLK HVVEAIAGRI  60
MNKRGKSKSK LIFYDLCSDG HKIQLMVFAD NFELDETEFS NLHDSVKRGD IVGVSGYPGF  120
NKKGELLFCP KTFKVLSPCL HMLPDVRKAN ANVEKWVPGC SRQPESYSLK DQVETPIMNA  180
CPSIGAARHF TASSDELKVK FFMRIAPELM LKQLVVGGLE RVYEIGKQFR SENVDLTHHP  240
EFTSCEFYMA YADYNDLIVL TETLLSGMMQ RLTGSTKIKC HCAGQKKNEN ETIEIDFTPP  300
FRRIDFIKEL EKQAGIIIPK DLYSDEAHKC LLEACQKAGV TCEPSLRTAR LLDKLADHYL  360
VKNCVNPTFI MNYPILMSPL AKHDKSMDGM TERFELFVNK RELINAYTEM NDPLLQRKQF  420
EELLKDLQHG NEDMKDDPFC VSLDYALPPT AGWGIGIDRL VMLVTDSQTI KEVLLFPKSI  480
KKPRSDGQHM VKTYEFKNMF ETPGKDDPNG RDISCHDLMV IKKTDSICAD VCGQTIDELR  540
EESLVLVVLM VIRDGVREDS EGGSSGSRIE GGFGASSWWI AGNTLSRMEF LDVQKDAGIN  600
LYPQNFEAVI SIADFMVKYG ELNNEEYLKE VQVSVAGRIT RKCPRSSKLL FYDLEDGGAK  660
VQVVADARIS ELEGSEFIKF HSSVKQFDIV GVTGFPAKLL TDSLSVHPAI KPQYETASQE  720
QHCDCPSSLP QNHGVSSSLS SSFRIVVVGD IHEDWKLEHD CKALHFLRPD LVLFTGDFGN  780
ENVELVKGIT ELNIPKGAIL GNHDAWSTSK FTKKVKDGVQ LQLECLGETH VGYDHLDFPS  840
LKLSVVGGRP FSCGGDNLFR KKLITSRYGI HNMEESADQI YKAALRTPKE NSIVLLSHNG  900
PTGLGSGNDD ICGVDWEPEG GDFGDRDLAQ AILQLKESTN YSIPLVVFGH MHKDLACGGS  960
RKMIAMDENN TMYLNAAIVP RVKCASSGAS LRAFTVVEFS DGKIAKTVVP CGAWAYVDCV  1020
GGLEPQIPHV TLGCVVELRG SPPCLYRLIT DARNVCAKLM APLLGPVTRS WVRGHVYKYE  1080
VVYKESEKSE LQWKQVNSDA EAYEMYNDYE FRHGFSIRKG KVRYVGSSSV WRGRNYLCSN  1140
AGLKDTSSKV PRKYSKLDYR TCCEAYIDFV IDEKGVWTAV KHNMDHNHAM IPVEKRHLLR  1200
SQRKIQATEK ASRLEGGDCN ALIKFFDARQ AKESDFYYEF EVDGNHALCS VFWRDGIMRR  1260
DYEAFGDLMV FDTTYRTNKY GMICAPFVGM NHHCNNVMFG MGFVLDEKTS SFQFDKYFQA  1320
SGTVCALGTL VLDDDGDPLI YSHPTTQGSN LSVLPKRKNV QSKNSKSSTN ASHSSSTNVF  1380
EGYSSNNFPR PNYSQPCSSK GSNTFSTTNV QSSSGNFSSD SHPTFSNVFG HQASTNSSQP  1440
SSSKASNSFS TSKPPLSNVF EGQSSDNIPV PNSSQPSPSK ASNTFPRTNA QPSSVCGSQA  1500
KNTKTFLRAS QPPLSNVIGR QSSTYFPSTG SQSSTRNVLS GSQGKKRKSS EVNHNRGF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-23	FAR1 family protein