PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041421-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 318aa    MW: 35112.4 Da    PI: 9.1364
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041421-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.61.3e-16227260134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C   kTp+WR gp g+ktLCnaCG++y++ +
  AUR62041421-RA 227 CMHCEIAKTPQWRAGPMGPKTLCNACGVRYKSGR 260
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MMEEIDSGNF FDQIDDLLEF PNDDVEKGLG DNGVAMNQYN NFPPVFWSDN SPVFSASHSN  60
TASDLSAELS VPYEDIVQLE WLSNFVEDSF AGSGLTVEKS QSTSYTKDPS RNQFQTSSPV  120
SVLESSSTCS RGKTLPVSHE KRARSKRPRP ATFNPRAHLI SPTPSISKTP RLLFAPSASL  180
SKSENFADSR PLKKKKKIKI LPPSGRISHN QNDNPNANTT SQALRKCMHC EIAKTPQWRA  240
GPMGPKTLCN ACGVRYKSGR LYPEYRPAAS PTFVPSLHSN SHKKVLEMRT KTPDENPAKI  300
SQEHEFIPKS GLPPAYI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146150KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.16e-45GATA family protein