PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041572-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 184aa    MW: 20204.5 Da    PI: 8.1403
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041572-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012120142123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C+k+Fs+   L  H  +H
  AUR62041572-RA 120 YECKTCNKTFSSFQALGGHRASH 142
                     99**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MVAHQQEAIV GDNNVVVVGE KDNMINNHTN NMMMMIKGKR TKRPRPLSPL ALTMSSATTT  60
DEGGANSATS EEWAAPVSAP SSEEEEDMAH CLILLAQGSN NNNNTSTNHK SNNGITTSSY  120
ECKTCNKTFS SFQALGGHRA SHKKPKTSAR MWHMWRGVLL RTSLRWSHET AQANWNDIND  180
NHP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14246KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03510.12e-20C2H2 family protein