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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | AUR62041671-RA | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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| Family | BES1 | ||||||||
| Protein Properties | Length: 298aa MW: 33000.1 Da PI: 9.3328 | ||||||||
| Description | BES1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF822 | 202.5 | 1.3e-62 | 1 | 129 | 4 | 133 |
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98
+rkp+w+ErEnn+rRERrRRaiaaki++GLR qGny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ +e++ s+++ s +ss+ s+
AUR62041671-RA 1 RRKPSWRERENNRRRERRRRAIAAKIFSGLRVQGNYNLPKHCDNNEVLKALCAEAGWIVEPDGTTYRKGMKPP-PPEIVASFSNFSACSSQIPSP 94
69***********************************************************************.****************99*** PP
DUF822 99 kssalaspvesysaspksssfpspssldsislasa 133
ssa++sp++sy++sp+ss+ +sps+ + + +++
AUR62041671-RA 95 LSSAFQSPIHSYQPSPSSSAPQSPSRNEINVQSHP 129
*************************9776655433 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 298 aa Download sequence |
RRKPSWRERE NNRRRERRRR AIAAKIFSGL RVQGNYNLPK HCDNNEVLKA LCAEAGWIVE 60 PDGTTYRKGM KPPPPEIVAS FSNFSACSSQ IPSPLSSAFQ SPIHSYQPSP SSSAPQSPSR 120 NEINVQSHPF SFLCNSIPSS LPPLRISNSA PVTPLLSSPT SKTAPKQPVF NFEAIAKESM 180 ASFNYPLFAA SAPSSPNRRR NFTPPTIPEC DESDCSTIDS GQWISFQRFS RPPIPTSPTF 240 NLVRPMVQKM SLNDAMEDRA RAPEPESMQV TPWEGERIHD VGMDDLELTL GSGTSRN* |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 1 | 20 | RRKPSWRERENNRRRERRRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G75080.2 | 2e-93 | BES1 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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