PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041746-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 284aa    MW: 32165.9 Da    PI: 9.1556
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041746-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.31.1e-1436123186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+++ ++aLiea  + + +l+rg+l++++W +v+  + + g   +r+ +qCk++++ l+k+yk +k    + + + +s +p+f+ l+
  AUR62041746-RA  36 CWSEDTTHALIEAWGSHHLSLNRGNLRQHHWLKVATTVNAAGDrrRRTDIQCKNRIDTLKKKYKIEKSKTVDSSGGYVSPWPFFSLLD 123
                     7*************************************8888733569**********************9999999*******9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MATNADGTSP SPALRPRPQP LPATLTRASP VLREDCWSED TTHALIEAWG SHHLSLNRGN  60
LRQHHWLKVA TTVNAAGDRR RRTDIQCKNR IDTLKKKYKI EKSKTVDSSG GYVSPWPFFS  120
LLDFLISGDG EKPLSSGRKI SPDTXXXXXX XXXFPVAPRS ALIRKRPVPV DDSFFRRQFA  180
AVIAAAAEVE AHESSEERER ESSERTGTSS DSGGRERRDS RVEDEGFNNG CRKLAEAIMR  240
FGEVYERVET VKQEQLIDLE KHRMQFTKDL EYQRMKLLMD TQL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-37Trihelix family protein