PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041943-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YB
Protein Properties Length: 224aa    MW: 24007.7 Da    PI: 6.5163
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041943-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB178.75.2e-5624118195
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimk++lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfe+y++plkvyl++yre ++
  AUR62041943-RA  24 VREQDRYLPIANISRIMKRALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLTRYREGDT 118
                     69*****************************************************************************************9665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MADAPTSPGG GSHESGDQSP RSNVREQDRY LPIANISRIM KRALPANGKI AKDAKETVQE  60
CVSEFISFIT SEASDKCQRE KRKTINGDDL LWAMATLGFE EYIDPLKVYL TRYREGDTKG  120
SAKGGETSGK RDAMGNQQPQ LAHQGSFNQA MNYGNSQHGD SVVYHKPTSV VLVHLRFGEE  180
LVGSVTADIA GNQSPTVSGS RPAAGAGEAT QAQHLMVPMQ GPE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.13e-80NF-YB family protein