PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62041986-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TCP

Protein Properties

Length: 222aa MW: 24248 Da PI: 7.275

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62041986-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.1	3.8e-35	68	148	4	82
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa..sec.eaesssssa 82 k ++++++hTkv+gR+RRvR++ +caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt++ +a + ++++sss++ AUR62041986-RA 68 KHSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTIEWLLRQAEPSIIAATGTGTVPAvaD-FsSPAKSSSTN 148 6789**********************************************************88888331.12222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MSSETTILHN LQNSDQPQFT SQESQQQQSL PLSFSLPFPP MSITSCSSKS TTNNTSTTAA 60 KLAVTRRKHS STKDRHTKVN GRGRRVRMPP LCAARIFQLT RELGHRTDGQ TIEWLLRQAE 120 PSIIAATGTG TVPAVADFSS PAKSSSTNAI AALPLSMDNG WHFPSQTVGL EFGYRHIPSF 180 TALLLQPDDG EMKMRYQHEA HEAQEQGEGE GEGIAKQEVE N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	9e-30	TCP family protein