PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042011-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 229aa    MW: 25651.6 Da    PI: 4.6984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042011-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.53e-174491354
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                    + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++
  AUR62042011-RA 44 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMK 91
                    56******.**********965...5***********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MKPAFQQQQI CSASMLFPFL QRNTSISQTN ERRGRRKQAE PGRFLGVRRR PWGRYAAEIR  60
DPTTKERHWL GTFDTAHEAA LAYDRAALSM KENCLRPAPS ENDPPIISTI VKNTDHNSIT  120
NNNVEYPMSS SSYDPQDHYS FSSLSNTNEE SISGNLSLEI SSNFSDYCDD LAAIINHPLM  180
MEEGCMMEGL YPVIEELPAA SSYFTMPCAG FSSAPYSDDM LDLGYSLF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.19e-40ERF family protein