PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62042023-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARR-B

Protein Properties

Length: 554aa MW: 60018.6 Da PI: 6.9122

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62042023-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.1	2.2e-24	167	216	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kprl W+ eLH++Fv+av+qL G +kA Pk+il+lm+v+gLt+e+v+SHLQ AUR62042023-RA 167 KPRLFWSVELHQKFVDAVNQL-GLDKAFPKKILDLMNVEGLTREKVASHLQ 216 79*****************.*************************** PP
2	Myb_DNA-binding	37.3	6.4e-12	169	216	1	45
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 r+ W+ e+++++vdav+qlG + +k+I m+ +g+t++ + s++q AUR62042023-RA 169 RLFWSVELHQKFVDAVNQLGLDkaFPKKILDLMNvEGLTREKVASHLQ 216 678*******************************************98 PP
3	Response_reg	83.1	8.5e-28	15	123	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+++ ++l+ ++l+k ++ +v+++ +++eal++lk+++ +D+++ D+emp+m+G++ll+ + e ++lp+i+++a+++ + + + ++ G AUR62042023-RA 15 VLVVDDDNTSLKLMDNLLRKCHF-HVTTTNQAKEALRILKANKnkYDIVISDVEMPDMNGIKLLQILGLE-MDLPVIMLSAYSDTKRVMDGVRNG 107 89*******************.***********887778***************999654.48****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ ++el + AUR62042023-RA 108 ACDYLVKPVRIQELQN 123 ***********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MASLENERFP KGLRVLVVDD DNTSLKLMDN LLRKCHFHVT TTNQAKEALR ILKANKNKYD 60 IVISDVEMPD MNGIKLLQIL GLEMDLPVIM LSAYSDTKRV MDGVRNGACD YLVKPVRIQE 120 LQNIWQHIVR RKQKAAGGGK CGPGRNASGN RRDGPQEGNE DPATQKKPRL FWSVELHQKF 180 VDAVNQLGLD KAFPKKILDL MNVEGLTREK VASHLQAGGS RLVSVGTEDS LAHIGGGYGV 240 YRSLAGPASY PGYSSLPDHA GGVLGRLNAA TGVASFRGIS SSPLLQTSQF PNSFNAATVR 300 FDPFPFSANQ NASYLLQANP TITTMQMNNR LPLLTPPTPP TSSMMLNTRE FDTQSSSNLG 360 INMSLDSTAK VSWGKPIQPV IHPLSSPQNL LPIPSNNNVS AADITPPNAQ THNDNPLDFL 420 FGTSSMGHPN AQIQDRPSSL NDFNIPAQGQ QVQKPNYFMN LCNISNASSS LIPAVAPTQG 480 ENNNNITAVP SLSQLEDASP QSQQQNDAHK SFDDSTGQNS TESLDDIVGR FLKQGNGEAA 540 AAPDLELDPF LMK*

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MASLENERFP KGLRVLVVDD DNTSLKLMDN LLRKCHFHVT TTNQAKEALR ILKANKNKYD  60
IVISDVEMPD MNGIKLLQIL GLEMDLPVIM LSAYSDTKRV MDGVRNGACD YLVKPVRIQE  120
LQNIWQHIVR RKQKAAGGGK CGPGRNASGN RRDGPQEGNE DPATQKKPRL FWSVELHQKF  180
VDAVNQLGLD KAFPKKILDL MNVEGLTREK VASHLQAGGS RLVSVGTEDS LAHIGGGYGV  240
YRSLAGPASY PGYSSLPDHA GGVLGRLNAA TGVASFRGIS SSPLLQTSQF PNSFNAATVR  300
FDPFPFSANQ NASYLLQANP TITTMQMNNR LPLLTPPTPP TSSMMLNTRE FDTQSSSNLG  360
INMSLDSTAK VSWGKPIQPV IHPLSSPQNL LPIPSNNNVS AADITPPNAQ THNDNPLDFL  420
FGTSSMGHPN AQIQDRPSSL NDFNIPAQGQ QVQKPNYFMN LCNISNASSS LIPAVAPTQG  480
ENNNNITAVP SLSQLEDASP QSQQQNDAHK SFDDSTGQNS TESLDDIVGR FLKQGNGEAA  540
AAPDLELDPF LMK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	5e-89	ARR-B family protein