PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042129-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 242aa    MW: 26782.3 Da    PI: 4.9581
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042129-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.27.2e-1591191290
            FAR1   2 fYneYAkevGFsvrkskskks..krngeit.krtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 
                     ++n+Y+k+ GF v++ +s ++  k+  +i+   t++C + gk+++++k          + +   t++++++gC a++  +++++gkwe+ k+ l 
  AUR62042129-RA  91 YFNAYGKQQGFGVVRGQSAYKhfKDGSKIKrAVTWKCDCCGKPDTRRKVggkriarelEGEPVATNKSKKCGCVAMVYGSLTSNGKWELRKVCLS 185
                     89************999877755444444414699**********9999999999888888888******************************* PP

            FAR1  85 HnHela 90 
                     H+H ++
  AUR62042129-RA 186 HSHLFS 191
                     ***886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MEYREEEEGK LVAQDDVLLS IDDDDEEMLQ FIKYDGVGAG DSGDSRSIDE AKGEVDGEGN  60
GGGDLVDMRF LNVDPPEIGM TFDSWQEIDV YFNAYGKQQG FGVVRGQSAY KHFKDGSKIK  120
RAVTWKCDCC GKPDTRRKVG GKRIARELEG EPVATNKSKK CGCVAMVYGS LTSNGKWELR  180
KVCLSHSHLF SPSKSMLVTK YRLEELKNVP NTGLFVFAEK YVAAMEQRLL SDGNSAMFLV  240
V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.13e-10FAR1 family protein