PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62042152-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 326aa MW: 36923.8 Da PI: 7.5921

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62042152-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.9	3.1e-08	63	137	1	86
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 k+Yn+++k+ GF v+ +s +r + i gkr +++ + + t++++++gC+ak+ ++++gkwe+ ++el+H AUR62042152-RA 63 KYYNAFGKQEGFGVVLGQSFPDTRRR-I---------GGKRLPNELE-GEPVVTKKSKKCGCEAKMYAGLKDHGKWEIVRVELKHK 137 58999999999999999988873333.3.........4555555555.556667778****************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
DEGGVMDLIN FEKGAGVDIG ELCPYEGGVG MDSDGGNMVN LNIIKIDAPE VGMIFDSWEE 60 ADKYYNAFGK QEGFGVVLGQ SFPDTRRRIG GKRLPNELEG EPVVTKKSKK CGCEAKMYAG 120 LKDHGKWEIV RVELKHKPHQ VSLLKSILVT KYRLEELEKM HVRRKLHFGE DVELPAATMH 180 KWLARLCDFA EKYVAAMERR IQSESGILCR HFIKVLELQQ IVDVPSMYIL DRWRKDIFRK 240 HTRVKVAFHD PRKIADLARY DKMMVVFEPI SNLTSENDET MMMVIAGLKE LEMKVKEKTT 300 PALPMSNVGE TGYKSTPPSV NGFNI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18960.1	2e-08	FAR1 family protein