PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042175-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 169aa    MW: 18837.5 Da    PI: 6.5198
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042175-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.37.6e-1573160499
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      ++ps+v+   +l lp +f+++   + +++ t+tl de+g ++   +    ++ +  l++GW++F+ a++L +gD v+F+++++s f  +v ++r
  AUR62042175-RA  73 PMLPSHVTGCFWLGLPSDFCRTSL-P-NNDATITLVDEEGDEYPTVY--LPRKTG--LSGGWRGFAMAHELVDGDNVIFQVISHSIF--KVYIIR 159
                     6889****************8774.3.46679***************..555544..***********************9998999..888888 PP

                     S CS
              B3  99 k 99 
                     +
  AUR62042175-RA 160 R 160
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MVAVRRSARV AKSPAPVYVE VHLPRLASPR KTYGVVRGNY GVATEEERAY TIEKAEKLVA  60
KLEEEGYPTV IRPMLPSHVT GCFWLGLPSD FCRTSLPNND ATITLVDEEG DEYPTVYLPR  120
KTGLSGGWRG FAMAHELVDG DNVIFQVISH SIFKVYIIRR RDDVALEE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-41B3 family protein