PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62042190-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 452aa MW: 52945.4 Da PI: 7.8723

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62042190-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.1	5.8e-08	9	52	47	90
FAR1 47 ktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++++ r+ a tr +Cka+++ + +k+gk+ev + +HnHel+ AUR62042190-RA 9 VKTRKPRQVAITRSNCKACIRARVNKEGKFEVVAHVIQHNHELT 52 35678889999*******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MVNEEDVNVK TRKPRQVAIT RSNCKACIRA RVNKEGKFEV VAHVIQHNHE LTRSQWHYLH 60 RSERKMTEEK AEAIKTMKSS GLTTMDTYNY MATEAGGEHN IGYSIVDHLN FCSRLRMEQI 120 EARDAQTLVN ILNQEQSKDP NFFFRVKFDK EGRISNIFWR DSMMLEDYRI YGDVLVFDTT 180 YRTNRYNLIC APFVGINNHW HNCMFACAFI GKEKTDSFVW LLETFLKAME NRLPTSIFTD 240 QDQAMANAIE QVLPNTRHRL CIWHLEQNAI TRFGALKKDK EFKYAFNQCL KMCVNEQEFE 300 AKWQAMMQKY ELTSHSWYQR VYELKEKWCP ALSRDFFSAG ILSSQRSEST NHAMGFRESK 360 ATTLTEFYTI FKKTINRWRS IEKYDEFTCS KSITFTSLPL SGMLKHAAQV FTLSLFRDFE 420 EEFGYSMATG VQMIGGNEEC LLYQVALEDK P*

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MVNEEDVNVK TRKPRQVAIT RSNCKACIRA RVNKEGKFEV VAHVIQHNHE LTRSQWHYLH  60
RSERKMTEEK AEAIKTMKSS GLTTMDTYNY MATEAGGEHN IGYSIVDHLN FCSRLRMEQI  120
EARDAQTLVN ILNQEQSKDP NFFFRVKFDK EGRISNIFWR DSMMLEDYRI YGDVLVFDTT  180
YRTNRYNLIC APFVGINNHW HNCMFACAFI GKEKTDSFVW LLETFLKAME NRLPTSIFTD  240
QDQAMANAIE QVLPNTRHRL CIWHLEQNAI TRFGALKKDK EFKYAFNQCL KMCVNEQEFE  300
AKWQAMMQKY ELTSHSWYQR VYELKEKWCP ALSRDFFSAG ILSSQRSEST NHAMGFRESK  360
ATTLTEFYTI FKKTINRWRS IEKYDEFTCS KSITFTSLPL SGMLKHAAQV FTLSLFRDFE  420
EEFGYSMATG VQMIGGNEEC LLYQVALEDK P*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-81	FAR1 family protein