PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042441-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 251aa    MW: 26830.2 Da    PI: 8.3718
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042441-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.86.2e-18194228135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  AUR62042441-RA 194 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 228
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MGSPAADRVS SEGLAPDDST VVTPVDSCNS SFSGNNDSIF PPAGDIGSHF SGELGVPYDD  60
LAELEWLSNF VEESFSSEDL HKFHLIPAMS AMKTRTDDVS ETRYYPTEQT RPTPLPTSPI  120
FSPEMAVPGK ARSKRSRAAS CNWASRLLVL APGGNEQVPV AKPAKSVGSK KKGSSLGGVG  180
PMVDSTSGGE VRKCLHCATD KTPQWRTGPM GPKTLCNACG VRYKSGRLVP EYRPAASPTF  240
MLTKHSNSHR K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.12e-69GATA family protein