PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042610-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YB
Protein Properties Length: 185aa    MW: 20228.7 Da    PI: 9.5898
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042610-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB179.43.2e-5624118195
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimk++lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfe+y++plkvyl++yre ++
  AUR62042610-RA  24 VREQDRYLPIANISRIMKRALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLTRYREGDT 118
                     69*****************************************************************************************9665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MADAPTSPGG GSHESGDQSP RSNVREQDRY LPIANISRIM KRALPANGKI AKDAKETVQE  60
CVSEFISFIT SEASDKCQRE KRKTINGDDL LWAMATLGFE EYIDPLKVYL TRYREGDTKG  120
SAKGGEASGK RDAVGNQQPQ LAHQGSFNQA MNYGNSQVRF ALIDKVKKLF VVAGPASNGS  180
YARPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.13e-73NF-YB family protein