PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042632-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 172aa    MW: 19357.8 Da    PI: 7.3598
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042632-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.21.5e-0990169990
            FAR1   9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       GF++rk k ++  ++     r++ C + g ++++ k    ++ ++    t C+a +    +++g+w   k + +HnH++ 
  AUR62042632-RA  90 LHGFTIRKGKIRYVGNSSVWRGRNYLCLNAGLKDTSYKV--PRKFSKLDYPTYCEAYIDFVIDEKGVWTAVKHNMDHNHAMI 169
                     67*******************************999877..999999999*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MHNGPKSIAG KDQGEYASTT EKLQGSCLFG QEIINQEHVD HVALEVSINS ESSPCGIYLT  60
NFDPEHNVHR ENISLGHLKI LNDSPFHNTL HGFTIRKGKI RYVGNSSVWR GRNYLCLNAG  120
LKDTSYKVPR KFSKLDYPTY CEAYIDFVID EKGVWTAVKH NMDHNHAMIP V*