PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042990-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 259aa    MW: 28893.1 Da    PI: 4.3055
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042990-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.7e-111842241055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  AUR62042990-RA 184 RKRRERINERLRILQSLVPNG-----TKVDISTMLEEAVHYVKFLQ 224
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MMMEAEWGSF NGISVNDEAD FMAQLFPNCS LEQELESCSL ALSSSCYSGN SMERSDSLNL  60
EISCGGSFED QPELSENKHL QLKQEYEMSE VEPASETEAV AYLRVERKDL EFLRTKRNQK  120
SGSDDEDNAP DFTKQNSSTS SEELEECNGS QELGSKETAA AVKMNGKTRA SRGAATDPQS  180
LYARKRRERI NERLRILQSL VPNGTKVDIS TMLEEAVHYV KFLQLQIKLL SSDEMWMYAP  240
LAYNGVDFGL DSKISALL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.14e-45bHLH family protein