PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043017-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family G2-like
Protein Properties Length: 240aa    MW: 26685.8 Da    PI: 6.3928
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043017-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.23.2e-123963125
         G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                    kprlrWt eLH+rFv+av+qLGG++
  AUR62043017-RA 39 KPRLRWTLELHDRFVDAVAQLGGPD 63
                    79*********************97 PP
2Myb_DNA-binding28.82.8e-094162122
                     TSSS-HHHHHHHHHHHHHTTTT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg 22
                     r+rWT e+++++vdav+qlGg+
   AUR62043017-RA 41 RLRWTLELHDRFVDAVAQLGGP 62
                     89******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MFHPQRPSST AMNKSNERSS SSSMCAQNDS GLILTTDPKP RLRWTLELHD RFVDAVAQLG  60
GPDIVSSSLE AHRNTASSSG FMNRNINENN VHISDAIQMQ MEVQRRLQEQ LEVQRHLQLR  120
IEAQGKYMQN IIEKACLTLA GETNSSASAS YKGTNILPGN SPHMNFPCLQ DLNIYSGDQV  180
DHQQSMDASR PSFENFMKAP YDNLCFGKKR PNPYIGDNGK SPVIWFEDLG LQELGPSAN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.24e-41G2-like family protein